EnhancerDB
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  3. rs554062060[chr5:14183706]
Enhancers that have rs554062060[chr5:14183706]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 14142745 14193315 enh22052
Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs554062060[chr5:14183706]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 14183695 14183706 HOXA10 JASPAR yes 61020539
chr5 14183696 14183706 HOXD13 JASPAR yes 61020548
chr5 14183698 14183719 IRF1 JASPAR yes 61020549
chr5 14183700 14183710 MEF2A JASPAR yes 61020550
chr5 14183702 14183716 SPIC JASPAR yes 61020551
chr5 14183702 14183717 PRDM1 JASPAR yes 61020552
chr5 14183702 14183723 IRF1 JASPAR yes 61020553
Genes associated with rs554062060[chr5:14183706], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More