EnhancerDB
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  3. rs554073200[chr17:65397962]
Enhancers that have rs554073200[chr17:65397962]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65392925 65424130 enh17321
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs554073200[chr17:65397962]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65397956 65397971 FOXP1 JASPAR yes 55498469
chr17 65397957 65397972 FOXP1 JASPAR yes 55498470
chr17 65397957 65397978 IRF1 JASPAR yes 55498471
chr17 65397958 65397973 FOXP1 JASPAR yes 55498472
chr17 65397958 65397979 IRF1 JASPAR yes 55498473
chr17 65397959 65397974 FOXP1 JASPAR yes 55498474
chr17 65397959 65397980 IRF1 JASPAR yes 55498475
chr17 65397960 65397975 FOXP1 JASPAR yes 55498476
chr17 65397962 65397977 FOXP1 JASPAR yes 55498477
Genes associated with rs554073200[chr17:65397962], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More