EnhancerDB
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  3. rs554081972[chr11:65214079]
Enhancers that have rs554081972[chr11:65214079]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 65180298 65217415 enh1825
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs554081972[chr11:65214079]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 65210875 65214679 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21492936
chr11 65211731 65214631 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21492952
chr11 65211759 65214686 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21492953
chr11 65212321 65215137 ZNF274 GTRD no Blood (GM12878) 21492970
chr11 65213187 65214961 ZNF274 GTRD no Blood (GM12878) 21492976
chr11 65213191 65214769 ZNF274 GTRD no Blood (GM12878) 21492977
chr11 65213231 65214619 TCF7L2 GTRD no Colon (HCT116) 21492979
chr11 65213234 65214663 ZNF274 GTRD no Blood (GM12878) 21492980
chr11 65213264 65215081 ZNF274 GTRD no Blood (GM12878) 21492981
chr11 65213268 65214084 ZNF274 GTRD no Blood (GM12878) 21492982
chr11 65213318 65214456 ZNF274 GTRD no Blood (GM12878) 21492987
chr11 65213344 65214570 TCF7L2 GTRD no Colon (HCT116) 21492990
chr11 65213386 65214294 ZNF274 GTRD no Blood (GM12878) 21492993
chr11 65213413 65214090 SOX2 GTRD no Neural Stem Cells (H9) 21492995
chr11 65213462 65214483 TCF7L2 GTRD no Colon (HCT116) 21492998
chr11 65213519 65214162 ZNF274 GTRD no Blood (GM12878) 21493000
chr11 65213595 65214578 ZNF274 GTRD no Blood (GM12878) 21493004
chr11 65213750 65214458 TCF7L2 GTRD no Colon (HCT116) 21493008
chr11 65213805 65214305 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21493009
chr11 65213991 65214409 ZNF274 GTRD no Blood (GM12878) 21493010
Genes associated with rs554081972[chr11:65214079], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More