EnhancerDB
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  3. rs554099489[chr4:148671987]
Enhancers that have rs554099489[chr4:148671987]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 148667325 148718095 enh37177
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Heart
Transcript factors that have rs554099489[chr4:148671987]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 148671969 148671987 RARA JASPAR yes 93516655
chr4 148671976 148671989 NR2F1 JASPAR yes 93516656
Genes associated with rs554099489[chr4:148671987], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More