EnhancerDB
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  3. rs554116166[chr1:95080803]
Enhancers that have rs554116166[chr1:95080803]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 95053805 95129570 enh12075
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr1 95080650 95081082 vista2558
VISTA
Transcript factors that have rs554116166[chr1:95080803]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 95080393 95080927 ZNF274 GTRD no Bone Marrow (K562) 107815746
chr1 95080551 95080913 SOX2 GTRD no Neural Stem Cells (H9) 107815747
chr1 95080754 95080823 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107815748
chr1 95080793 95080814 IRF1 JASPAR yes 30894500
chr1 95080793 95080814 IRF1 JASPAR yes 118333205
chr1 95080795 95080810 PRDM1 JASPAR yes 30894501
chr1 95080795 95080810 STAT2 JASPAR yes 30894502
chr1 95080795 95080810 PRDM1 JASPAR yes 118333206
chr1 95080795 95080810 STAT2 JASPAR yes 118333207
chr1 95080796 95080810 STAT1 JASPAR yes 30894503
chr1 95080796 95080810 STAT1 JASPAR yes 118333208
chr1 95080797 95080809 IRF1 JASPAR yes 30894504
chr1 95080797 95080809 IRF1 JASPAR yes 118333209
chr1 95080801 95080812 ELK4 JASPAR yes 30894505
chr1 95080801 95080812 FLI1 JASPAR yes 30894506
chr1 95080801 95080812 ELK4 JASPAR yes 118333210
chr1 95080801 95080812 FLI1 JASPAR yes 118333211
chr1 95080801 95080814 ELF3 JASPAR yes 30894507
chr1 95080801 95080814 ELF3 JASPAR yes 118333212
chr1 95080802 95080812 ELK1 JASPAR yes 30894508
chr1 95080802 95080812 ELK3 JASPAR yes 30894509
chr1 95080802 95080812 ERF JASPAR yes 30894510
chr1 95080802 95080812 ERG JASPAR yes 30894511
chr1 95080802 95080812 ETS1 JASPAR yes 30894512
chr1 95080802 95080812 ETV1 JASPAR yes 30894513
chr1 95080802 95080812 ETV3 JASPAR yes 30894514
chr1 95080802 95080812 ETV4 JASPAR yes 30894515
chr1 95080802 95080812 ETV6 JASPAR yes 30894516
chr1 95080802 95080812 FEV JASPAR yes 30894517
chr1 95080802 95080812 FLI1 JASPAR yes 30894518
chr1 95080802 95080812 GABPA JASPAR yes 30894519
chr1 95080802 95080812 ELK1 JASPAR yes 118333213
chr1 95080802 95080812 ELK3 JASPAR yes 118333214
chr1 95080802 95080812 ERF JASPAR yes 118333215
chr1 95080802 95080812 ERG JASPAR yes 118333216
chr1 95080802 95080812 ETS1 JASPAR yes 118333217
chr1 95080802 95080812 ETV1 JASPAR yes 118333218
chr1 95080802 95080812 ETV3 JASPAR yes 118333219
chr1 95080802 95080812 ETV4 JASPAR yes 118333220
chr1 95080802 95080812 ETV6 JASPAR yes 118333221
chr1 95080802 95080812 FEV JASPAR yes 118333222
chr1 95080802 95080812 FLI1 JASPAR yes 118333223
chr1 95080802 95080812 GABPA JASPAR yes 118333224
chr1 95080802 95080813 ELF5 JASPAR yes 30894520
chr1 95080802 95080813 ETV2 JASPAR yes 30894521
chr1 95080802 95080813 SPDEF JASPAR yes 30894522
chr1 95080802 95080813 ELF5 JASPAR yes 118333225
chr1 95080802 95080813 ETV2 JASPAR yes 118333226
chr1 95080802 95080813 SPDEF JASPAR yes 118333227
chr1 95080802 95080814 EHF JASPAR yes 30894523
chr1 95080802 95080814 ELF1 JASPAR yes 30894524
chr1 95080802 95080814 ELF4 JASPAR yes 30894525
chr1 95080802 95080814 EHF JASPAR yes 118333228
chr1 95080802 95080814 ELF1 JASPAR yes 118333229
chr1 95080802 95080814 ELF4 JASPAR yes 118333230
chr1 95080802 95080815 ELF1 JASPAR yes 30894526
chr1 95080802 95080815 ELF1 JASPAR yes 118333231
chr1 95080802 95080816 SPI1 JASPAR yes 30894527
chr1 95080802 95080816 SPIC JASPAR yes 30894528
chr1 95080802 95080816 SPI1 JASPAR yes 118333232
chr1 95080802 95080816 SPIC JASPAR yes 118333233
chr1 95080803 95080810 SPI1 JASPAR yes 30894529
chr1 95080803 95080810 SPI1 JASPAR yes 118333234
chr1 95080803 95080811 EHF JASPAR yes 30894530
chr1 95080803 95080811 FEV JASPAR yes 30894531
chr1 95080803 95080811 EHF JASPAR yes 118333235
chr1 95080803 95080811 FEV JASPAR yes 118333236
Genes associated with rs554116166[chr1:95080803], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More