EnhancerDB
  1. Home
  2. SNP
  3. rs554175309[chr6:16323230]
Enhancers that have rs554175309[chr6:16323230]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 16314945 16326043 enh8974
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr6 16322882 16323237 vista51140
VISTA
Transcript factors that have rs554175309[chr6:16323230]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 16322876 16323256 ATF2 UCSC Txn Factor no Conserved 108538859
chr6 16322907 16323254 JUND UCSC Txn Factor no Conserved 108538861
chr6 16322954 16323355 MAX UCSC Txn Factor no Conserved 108538864
chr6 16322981 16323245 CEBPB UCSC Txn Factor no Conserved 108538866
Genes associated with rs554175309[chr6:16323230], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More