EnhancerDB
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  3. rs554189621[chr16:24996344]
Enhancers that have rs554189621[chr16:24996344]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 24992965 25014102 enh3954
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs554189621[chr16:24996344]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 24996336 24996350 SPIC JASPAR yes 10092097
chr16 24996342 24996346 H1TF2 TRANSFAC yes 10092098
chr16 24996342 24996346 NFE TRANSFAC yes 10092099
chr16 24996342 24996346 SRF TRANSFAC yes 10092100
Genes associated with rs554189621[chr16:24996344], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More