EnhancerDB
  1. Home
  2. SNP
  3. rs554204346[chr11:123028248]
Enhancers that have rs554204346[chr11:123028248]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 123027364 123061967 enh14348
Brain (SK-N-MC) Astrocyte Pancreas Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs554204346[chr11:123028248]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 123028235 123028248 SCRT2 JASPAR yes 42051375
chr11 123028239 123028254 IRF9 JASPAR yes 42051376
chr11 123028241 123028259 IRF2 JASPAR yes 42051377
Genes associated with rs554204346[chr11:123028248], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More