EnhancerDB
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  3. rs554223263[chr3:58031933]
Enhancers that have rs554223263[chr3:58031933]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58016005 58062055 enh20647
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs554223263[chr3:58031933]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58031927 58031947 ESR1 JASPAR yes 2668880
chr3 58031928 58031938 RORA JASPAR yes 2668881
chr3 58031929 58031940 ESRRA JASPAR yes 2668882
chr3 58031930 58031948 ESR1 JASPAR yes 2668883
chr3 58031930 58031948 ESR2 JASPAR yes 2668884
chr3 58031932 58031947 ESR2 JASPAR yes 2668885
chr3 58031932 58031952 ESR1 JASPAR yes 2668886
chr3 58031933 58031937 ESR1 TRANSFAC yes 2668887
Genes associated with rs554223263[chr3:58031933], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More