EnhancerDB
  1. Home
  2. SNP
  3. rs554255614[chr1:27969234]
Enhancers that have rs554255614[chr1:27969234]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27968485 27992074 enh178
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs554255614[chr1:27969234]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27969225 27969235 SREBF2 JASPAR yes 27717230
chr1 27969233 27969248 TFAP2C JASPAR yes 27717231
chr1 27969234 27969245 EBF1 JASPAR yes 27717232
Genes associated with rs554255614[chr1:27969234], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More