EnhancerDB
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  3. rs554272117[chr17:864509]
Enhancers that have rs554272117[chr17:864509]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 845785 881195 enh32038
Astrocyte Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs554272117[chr17:864509]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 864498 864510 HES5 JASPAR yes 52645831
chr17 864498 864510 HES7 JASPAR yes 52645832
chr17 864499 864509 HEY1 JASPAR yes 52645833
chr17 864499 864509 HEY2 JASPAR yes 52645834
chr17 864504 864517 SMAD2 JASPAR yes 52645835
Genes associated with rs554272117[chr17:864509], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More