EnhancerDB
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  3. rs554279586[chr6:25316186]
Enhancers that have rs554279586[chr6:25316186]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 25307668 25322997 enh38930
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Lung Stomach Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Uterus Muscle (Myoblast) Breast Neural Stem Cells (H9) Heart
Transcript factors that have rs554279586[chr6:25316186]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25316176 25316191 FOXA1 JASPAR yes 100844840
chr6 25316178 25316192 POU1F1 JASPAR yes 100844841
chr6 25316179 25316191 POU3F2 JASPAR yes 100844842
chr6 25316179 25316192 POU3F3 JASPAR yes 100844843
chr6 25316180 25316191 FOXA1 JASPAR yes 100844845
Genes associated with rs554279586[chr6:25316186], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More