EnhancerDB
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  3. rs554352026[chr17:56004262]
Enhancers that have rs554352026[chr17:56004262]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs554352026[chr17:56004262]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56004258 56004269 E2F4 JASPAR yes 55000425
chr17 56004258 56004269 E2F6 JASPAR yes 55000426
chr17 56004260 56004268 E2F1 JASPAR yes 55000427
Genes associated with rs554352026[chr17:56004262], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More