EnhancerDB
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  3. rs554416253[chr1:25091333]
Enhancers that have rs554416253[chr1:25091333]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25085286 25108435 enh141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Blood (Karpas-422) Uterus Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs554416253[chr1:25091333]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25091327 25091347 RREB1 JASPAR yes 27528567
chr1 25091330 25091350 RREB1 JASPAR yes 27528568
chr1 25091333 25091353 RREB1 JASPAR yes 27528569
Genes associated with rs554416253[chr1:25091333], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More