EnhancerDB
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  3. rs554418178[chr2:238588236]
Enhancers that have rs554418178[chr2:238588236]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238567229 238591955 enh19400
Brain (SK-N-MC) Liver Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs554418178[chr2:238588236]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238588224 238588236 IRF1 JASPAR yes 82131395
chr2 238588233 238588243 TEAD1 JASPAR yes 82131396
chr2 238588234 238588242 TEAD3 JASPAR yes 82131397
Genes associated with rs554418178[chr2:238588236], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More