EnhancerDB
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  3. rs554420174[chr16:29169143]
Enhancers that have rs554420174[chr16:29169143]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29150646 29173335 enh16623
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Ovary Esophagus Astrocyte Blood (T-cell) Lung (A549) Stomach Placenta Uterus Lung (PC-9) Breast Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs554420174[chr16:29169143]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29169133 29169143 ID4 JASPAR yes 10246462
chr16 29169133 29169143 NHLH1 JASPAR yes 10246463
chr16 29169133 29169143 TCF3 JASPAR yes 10246464
chr16 29169133 29169143 TCF4 JASPAR yes 10246465
chr16 29169135 29169144 ZEB1 JASPAR yes 10246466
chr16 29169140 29169148 E2F1 JASPAR yes 10246467
Genes associated with rs554420174[chr16:29169143], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More