EnhancerDB
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  3. rs554430985[chr16:29158960]
Enhancers that have rs554430985[chr16:29158960]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29150646 29173335 enh16623
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Ovary Esophagus Astrocyte Blood (T-cell) Lung (A549) Stomach Placenta Uterus Lung (PC-9) Breast Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs554430985[chr16:29158960]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29158011 29159503 TCF7L2 GTRD no Colon (HCT116) 108191341
chr16 29158029 29159332 TCF7L2 GTRD no Colon (HCT116) 108191342
chr16 29158539 29159180 TCF7L2 GTRD no Colon (HCT116) 108191343
chr16 29158958 29158962 H1TF2 TRANSFAC yes 10245082
chr16 29158958 29158962 NFE TRANSFAC yes 10245083
chr16 29158958 29158962 SRF TRANSFAC yes 10245084
chr16 29158958 29158969 ESRRA JASPAR yes 10245085
chr16 29158959 29158977 ESR2 JASPAR yes 10245086
Genes associated with rs554430985[chr16:29158960], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More