EnhancerDB
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  3. rs554442394[chr16:25002803]
Enhancers that have rs554442394[chr16:25002803]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 24992965 25014102 enh3954
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs554442394[chr16:25002803]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 25002792 25002807 FOXP1 JASPAR yes 10093055
chr16 25002793 25002814 IRF1 JASPAR yes 10093056
chr16 25002797 25002812 STAT2 JASPAR yes 10093057
Genes associated with rs554442394[chr16:25002803], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More