EnhancerDB
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  3. rs554467383[chr5:149841028]
Enhancers that have rs554467383[chr5:149841028]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 149834702 149859546 enh8799
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr5 149840923 149841036 vista49654
VISTA
Transcript factors that have rs554467383[chr5:149841028]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 149840577 149841328 POLR2A UCSC Txn Factor no Conserved 108536981
chr5 149840813 149841193 CHD2 UCSC Txn Factor no Conserved 108536982
chr5 149840897 149841236 TCF12 UCSC Txn Factor no Conserved 108536983
chr5 149840930 149841174 ESR1 UCSC Txn Factor no Conserved 108536984
chr5 149841010 149841029 PAX5 JASPAR yes 66880812
chr5 149841010 149841029 PAX5 JASPAR yes 70738688
chr5 149841024 149841034 SP1 JASPAR yes 66880813
chr5 149841024 149841034 SP1 JASPAR yes 70738689
chr5 149841025 149841035 SP1 JASPAR yes 66880814
chr5 149841025 149841035 SP1 JASPAR yes 70738690
Genes associated with rs554467383[chr5:149841028], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More