EnhancerDB
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  3. rs554542370[chr10:21642979]
Enhancers that have rs554542370[chr10:21642979]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 21636765 21666075 enh13040
Bone Marrow (K562) Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs554542370[chr10:21642979]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 21642876 21643621 ZNF143 GTRD no Epithelial (MCF-7) 21420988
chr10 21642957 21643765 ZNF143 GTRD no Epithelial (MCF-7) 21420989
chr10 21642960 21642981 IRF1 JASPAR yes 125900437
chr10 21642962 21642983 IRF1 JASPAR yes 125900438
chr10 21642964 21642985 IRF1 JASPAR yes 125900439
chr10 21642964 21642985 ZNF263 JASPAR yes 125900440
chr10 21642968 21642989 IRF1 JASPAR yes 125900441
chr10 21642968 21642989 ZNF263 JASPAR yes 125900442
chr10 21642972 21642993 IRF1 JASPAR yes 125900443
chr10 21642972 21642993 ZNF263 JASPAR yes 125900444
chr10 21642976 21642997 IRF1 JASPAR yes 125900445
chr10 21642976 21642997 ZNF263 JASPAR yes 125900446
chr10 21642976 21643633 ZNF143 GTRD no Epithelial (MCF-7) 21420990
Genes associated with rs554542370[chr10:21642979], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More