EnhancerDB
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  3. rs554542519[chr16:29173059]
Enhancers that have rs554542519[chr16:29173059]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29150646 29173335 enh16623
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Ovary Esophagus Astrocyte Blood (T-cell) Lung (A549) Stomach Placenta Uterus Lung (PC-9) Breast Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs554542519[chr16:29173059]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29173045 29173059 IRF7 JASPAR yes 10246988
chr16 29173059 29173074 RFX5 JASPAR yes 10246989
Genes associated with rs554542519[chr16:29173059], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More