EnhancerDB
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  3. rs554596926[chr1:227545087]
Enhancers that have rs554596926[chr1:227545087]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 227541685 227548089 enh12732
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Large Intestine Astrocyte Lung (A549) Stomach Placenta Adrenal Uterus Lung (PC-9) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs554596926[chr1:227545087]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 227544381 227545191 ZNF143 GTRD no Epithelial (MCF-7) 21387894
chr1 227544841 227545565 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21387897
chr1 227544854 227545514 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21387898
chr1 227544859 227545483 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21387899
chr1 227544862 227545258 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21387900
chr1 227544890 227545466 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21387901
chr1 227544901 227545285 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21387902
chr1 227544902 227545222 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21387903
chr1 227544906 227545130 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21387904
chr1 227544941 227545451 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21387905
chr1 227544960 227545610 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21387906
chr1 227544964 227545448 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21387907
chr1 227544968 227545172 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21387908
chr1 227544976 227545296 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21387909
chr1 227544980 227545456 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21387910
chr1 227544986 227545316 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21387911
chr1 227545003 227545507 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21387912
chr1 227545017 227545367 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21387913
chr1 227545017 227545557 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21387914
chr1 227545017 227545661 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21387915
chr1 227545021 227545417 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21387916
chr1 227545030 227545514 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21387917
chr1 227545043 227545519 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21387918
chr1 227545046 227545416 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21387919
chr1 227545050 227545490 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21387920
chr1 227545052 227545332 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21387921
chr1 227545059 227545363 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21387922
chr1 227545061 227545421 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21387923
chr1 227545073 227545333 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21387924
chr1 227545073 227545343 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21387925
chr1 227545077 227545088 E2F6 JASPAR yes 35872066
chr1 227545077 227545417 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21387926
chr1 227545081 227545517 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21387927
chr1 227545086 227545284 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21387928
chr1 227545087 227545603 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21387929
Genes associated with rs554596926[chr1:227545087], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More