EnhancerDB
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  3. rs554613028[chr2:235878580]
Enhancers that have rs554613028[chr2:235878580]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 235861765 235887439 enh19351
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs554613028[chr2:235878580]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 235878569 235878582 POU2F2 JASPAR yes 81924441
chr2 235878569 235878583 POU1F1 JASPAR yes 81924442
chr2 235878570 235878582 POU3F1 JASPAR yes 81924443
chr2 235878570 235878582 POU3F2 JASPAR yes 81924444
chr2 235878570 235878583 POU3F3 JASPAR yes 81924445
chr2 235878571 235878583 POU2F1 JASPAR yes 81924447
chr2 235878572 235878580 POU2F1 TRANSFAC yes 81924451
chr2 235878572 235878581 POU3F4 JASPAR yes 81924452
chr2 235878572 235878581 POU5F1B JASPAR yes 81924453
Genes associated with rs554613028[chr2:235878580], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More