EnhancerDB
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  3. rs554618009[chr5:173192596]
Enhancers that have rs554618009[chr5:173192596]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 173178093 173268555 enh8886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs554618009[chr5:173192596]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 173192591 173192609 IRF2 JASPAR yes 67902164
chr5 173192592 173192613 IRF1 JASPAR yes 67902165
chr5 173192593 173192613 PPARG JASPAR yes 67902166
chr5 173192594 173192609 STAT2 JASPAR yes 67902167
chr5 173192595 173192609 STAT1 JASPAR yes 67902168
Genes associated with rs554618009[chr5:173192596], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More