EnhancerDB
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  3. rs554675112[chr2:102428000]
Enhancers that have rs554675112[chr2:102428000]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 102416803 102440155 enh18762
Brain (SK-N-MC) Liver Astrocyte Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs554675112[chr2:102428000]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 102427990 102428009 REST JASPAR yes 75842937
chr2 102427995 102428008 ZBTB18 JASPAR yes 75842938
chr2 102427997 102428007 FIGLA JASPAR yes 75842939
chr2 102427997 102428007 ID4 JASPAR yes 75842940
chr2 102427997 102428007 TCF3 JASPAR yes 75842941
chr2 102427997 102428007 TCF4 JASPAR yes 75842942
Genes associated with rs554675112[chr2:102428000], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More