EnhancerDB
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  3. rs554742411[chr5:77883947]
Enhancers that have rs554742411[chr5:77883947]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 77878525 77914000 enh48956
Brain (SK-N-MC) Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr5 77883814 77884068 vista48160
VISTA
Transcript factors that have rs554742411[chr5:77883947]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 77883354 77884004 POLR2A UCSC Txn Factor no Conserved 108535479
chr5 77883371 77883976 GATA1 UCSC Txn Factor no Conserved 108535480
Genes associated with rs554742411[chr5:77883947], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More