EnhancerDB
  1. Home
  2. SNP
  3. rs554791316[chr1:235136363]
Enhancers that have rs554791316[chr1:235136363]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235130325 235168235 enh997
Bone Marrow (K562) Liver Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs554791316[chr1:235136363]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235135978 235136714 ZBTB33 GTRD no Brain (SK-N-SH) 21402900
chr1 235136135 235136383 ZNF274 GTRD no Bone Marrow (K562) 21402901
chr1 235136135 235136539 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21402902
chr1 235136161 235136551 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21402903
chr1 235136188 235136558 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21402904
chr1 235136220 235136500 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21402905
chr1 235136255 235136453 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21402906
chr1 235136358 235136375 RARA JASPAR yes 36340450
Genes associated with rs554791316[chr1:235136363], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More