EnhancerDB
  1. Home
  2. SNP
  3. rs554798534[chr1:33457407]
Enhancers that have rs554798534[chr1:33457407]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 33442929 33472683 enh216
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Heart
chr1 33457406 33457727 vista1137
VISTA
Transcript factors that have rs554798534[chr1:33457407]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 33457394 33457407 NR2F1 JASPAR yes 28020302
chr1 33457394 33457407 NR2F1 JASPAR yes 118269365
chr1 33457395 33457410 NR2C2 JASPAR yes 28020303
chr1 33457395 33457410 NR2C2 JASPAR yes 118269366
chr1 33457396 33457410 RXRB JASPAR yes 28020304
chr1 33457396 33457410 RXRG JASPAR yes 28020305
chr1 33457396 33457410 RXRB JASPAR yes 118269367
chr1 33457396 33457410 RXRG JASPAR yes 118269368
chr1 33457397 33457418 ZNF263 JASPAR yes 28020306
chr1 33457397 33457418 ZNF263 JASPAR yes 118269369
chr1 33457398 33457410 INSM1 JASPAR yes 28020308
chr1 33457398 33457410 INSM1 JASPAR yes 118269370
Genes associated with rs554798534[chr1:33457407], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More