EnhancerDB
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  3. rs554817741[chr2:227509937]
Enhancers that have rs554817741[chr2:227509937]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 227505953 227529050 enh19283
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs554817741[chr2:227509937]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 227509922 227509938 POU4F2 JASPAR yes 81477922
chr2 227509922 227509938 POU4F3 JASPAR yes 81477923
chr2 227509923 227509938 FOXA1 JASPAR yes 81477925
chr2 227509924 227509938 POU4F1 JASPAR yes 81477927
chr2 227509924 227509939 FOXP1 JASPAR yes 81477928
chr2 227509924 227509939 HNF1A JASPAR yes 81477929
chr2 227509925 227509937 FOXC2 JASPAR yes 81477930
chr2 227509925 227509939 ONECUT2 JASPAR yes 81477931
chr2 227509925 227509939 ONECUT3 JASPAR yes 81477932
chr2 227509926 227509937 FOXB1 JASPAR yes 81477933
chr2 227509926 227509937 FOXC1 JASPAR yes 81477934
chr2 227509926 227509937 PROP1 JASPAR yes 81477935
chr2 227509926 227509942 POU4F2 JASPAR yes 81477936
chr2 227509926 227509942 POU4F3 JASPAR yes 81477937
chr2 227509927 227509942 FOXA1 JASPAR yes 81477939
chr2 227509928 227509940 FOXI1 JASPAR yes 81477940
chr2 227509928 227509942 POU4F1 JASPAR yes 81477941
chr2 227509928 227509943 FOXP1 JASPAR yes 81477942
chr2 227509928 227509943 HNF1A JASPAR yes 81477943
chr2 227509929 227509941 FOXC2 JASPAR yes 81477944
chr2 227509929 227509943 ONECUT2 JASPAR yes 81477945
chr2 227509929 227509943 ONECUT3 JASPAR yes 81477946
chr2 227509930 227509941 FOXB1 JASPAR yes 81477947
chr2 227509930 227509941 FOXC1 JASPAR yes 81477948
chr2 227509930 227509941 PROP1 JASPAR yes 81477949
chr2 227509931 227509946 FOXA1 JASPAR yes 81477951
chr2 227509932 227509944 FOXI1 JASPAR yes 81477952
chr2 227509932 227509947 FOXP1 JASPAR yes 81477953
chr2 227509933 227509945 FOXC2 JASPAR yes 81477954
chr2 227509933 227509947 ONECUT2 JASPAR yes 81477955
chr2 227509933 227509947 ONECUT3 JASPAR yes 81477956
chr2 227509934 227509945 FOXB1 JASPAR yes 81477957
chr2 227509934 227509945 FOXC1 JASPAR yes 81477958
chr2 227509935 227509939 YY1 TRANSFAC yes 81477959
chr2 227509937 227509949 MEF2D JASPAR yes 81477960
Genes associated with rs554817741[chr2:227509937], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More