EnhancerDB
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  3. rs554826077[chr1:39863527]
Enhancers that have rs554826077[chr1:39863527]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39853990 39867590 enh11763
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs554826077[chr1:39863527]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39863517 39863531 STAT1 JASPAR yes 28273462
chr1 39863521 39863536 IRF9 JASPAR yes 28273463
chr1 39863522 39863536 IRF8 JASPAR yes 28273464
chr1 39863523 39863538 STAT2 JASPAR yes 28273465
Genes associated with rs554826077[chr1:39863527], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More