EnhancerDB
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  3. rs554828219[chr3:58024842]
Enhancers that have rs554828219[chr3:58024842]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58016005 58062055 enh20647
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs554828219[chr3:58024842]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58024839 58024849 MAX JASPAR yes 2667827
chr3 58024839 58024850 USF1 JASPAR yes 2667828
chr3 58024840 58024850 MAX JASPAR yes 2667829
chr3 58024840 58024850 MNT JASPAR yes 2667830
chr3 58024841 58024848 USF1 JASPAR yes 2667831
chr3 58024841 58024851 MAX JASPAR yes 2667832
chr3 58024842 58024847 MYC TRANSFAC yes 2667833
chr3 58024842 58024847 USF1 TRANSFAC yes 2667834
chr3 58024842 58024847 USF2 TRANSFAC yes 2667835
chr3 58024842 58024849 USF1 JASPAR yes 2667836
Genes associated with rs554828219[chr3:58024842], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More