EnhancerDB
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  3. rs554880145[chr5:148946976]
Enhancers that have rs554880145[chr5:148946976]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 148937365 148947295 enh8790
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs554880145[chr5:148946976]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 148946975 148946981 LEF1 TRANSFAC yes 66825401
chr5 148946975 148946981 SOX10 JASPAR yes 66825402
Genes associated with rs554880145[chr5:148946976], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More