EnhancerDB
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  3. rs554889149[chr3:58056663]
Enhancers that have rs554889149[chr3:58056663]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58016005 58062055 enh20647
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs554889149[chr3:58056663]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58056655 58056676 ZNF263 JASPAR yes 2672613
chr3 58056658 58056679 IRF1 JASPAR yes 2672614
chr3 58056660 58056675 PRDM1 JASPAR yes 2672615
Genes associated with rs554889149[chr3:58056663], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More