EnhancerDB
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  3. rs554891024[chr1:226865285]
Enhancers that have rs554891024[chr1:226865285]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 226864749 226865297 vista5371
VISTA
Transcript factors that have rs554891024[chr1:226865285]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226864909 226865293 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21387045
chr1 226864909 226865293 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107875913
chr1 226865125 226865485 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21387048
chr1 226865125 226865485 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107875916
chr1 226865276 226865289 TFAP2B JASPAR yes 35831741
chr1 226865276 226865289 TFAP2B JASPAR yes 118471906
chr1 226865277 226865290 TFAP2B JASPAR yes 35831742
chr1 226865277 226865290 TFAP2B JASPAR yes 118471907
chr1 226865277 226865291 PLAG1 JASPAR yes 35831743
chr1 226865277 226865291 PLAG1 JASPAR yes 118471908
Genes associated with rs554891024[chr1:226865285], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More