EnhancerDB
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  3. rs554931176[chr1:154380225]
Enhancers that have rs554931176[chr1:154380225]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154376585 154406743 enh12276
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs554931176[chr1:154380225]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154380215 154380225 TFAP4 JASPAR yes 32289000
chr1 154380219 154380230 E2F1 JASPAR yes 32289001
chr1 154380222 154380234 ZBTB7A JASPAR yes 32289002
chr1 154380223 154380228 SP1 TRANSFAC yes 32289003
Genes associated with rs554931176[chr1:154380225], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More