EnhancerDB
  1. Home
  2. SNP
  3. rs554957505[chr1:157980116]
Enhancers that have rs554957505[chr1:157980116]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 157969514 158001213 enh12308
Brain (SK-N-MC) Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs554957505[chr1:157980116]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 157980102 157980116 E2F7 JASPAR yes 32456853
chr1 157980105 157980125 RREB1 JASPAR yes 32456855
chr1 157980107 157980121 FOXF2 JASPAR yes 32456856
chr1 157980107 157980127 RREB1 JASPAR yes 32456857
chr1 157980108 157980122 PLAG1 JASPAR yes 32456858
chr1 157980109 157980129 RREB1 JASPAR yes 32456859
chr1 157980112 157980120 FOXG1 JASPAR yes 32456860
chr1 157980114 157980120 HiNF-A TRANSFAC yes 32456861
chr1 157980115 157980135 RREB1 JASPAR yes 32456862
Genes associated with rs554957505[chr1:157980116], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More