EnhancerDB
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  3. rs554983024[chr3:189772954]
Enhancers that have rs554983024[chr3:189772954]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 189764625 189785155 enh36259
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Muscle (A673) Colon (HCT116) Pancreas (Panc1) Uterus Lung (PC-9) Muscle (Myoblast) Spleen Neural Stem Cells (H9) Stomach
Transcript factors that have rs554983024[chr3:189772954]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 189772941 189772960 CTCF JASPAR yes 8616163
chr3 189772944 189772958 ZIC1 JASPAR yes 8616164
chr3 189772944 189772959 ZIC4 JASPAR yes 8616165
chr3 189772947 189772961 PLAG1 JASPAR yes 8616166
Genes associated with rs554983024[chr3:189772954], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More