EnhancerDB
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  3. rs555002385[chr12:46828251]
Enhancers that have rs555002385[chr12:46828251]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46820955 46858735 enh14676
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs555002385[chr12:46828251]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46828091 46828290 ZNF143 GTRD no Epithelial (MCF-7) 21541609
chr12 46828235 46828256 IRF1 JASPAR yes 120619797
chr12 46828236 46828251 MEF2A JASPAR yes 120619798
chr12 46828239 46828254 STAT2 JASPAR yes 120619799
chr12 46828240 46828252 IRF1 JASPAR yes 120619800
chr12 46828249 46828263 ONECUT2 JASPAR yes 120619801
chr12 46828249 46828263 ONECUT3 JASPAR yes 120619802
chr12 46828249 46828264 FOXP1 JASPAR yes 120619803
chr12 46828250 46828261 FOXA1 JASPAR yes 120619804
chr12 46828250 46828265 FOXA1 JASPAR yes 120619805
chr12 46828251 46828262 FOXB1 JASPAR yes 120619806
chr12 46828251 46828262 FOXC1 JASPAR yes 120619807
chr12 46828251 46828263 FOXC2 JASPAR yes 120619808
Genes associated with rs555002385[chr12:46828251], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More