EnhancerDB
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  3. rs555018555[chr1:234847853]
Enhancers that have rs555018555[chr1:234847853]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234827105 234875936 enh12795
Bone Marrow (K562) Liver Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs555018555[chr1:234847853]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234846140 234850353 ZNF274 GTRD no Bone Marrow (K562) 21396143
chr1 234847318 234848164 ZNF274 GTRD no Blood (GM12878) 21396150
chr1 234847685 234848189 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21396151
chr1 234847848 234847856 TBX5 JASPAR yes 36305895
chr1 234847848 234847857 ZEB1 JASPAR yes 36305896
chr1 234847848 234847861 ZBTB18 JASPAR yes 36305897
chr1 234847849 234847859 ID4 JASPAR yes 36305898
chr1 234847849 234847859 TCF3 JASPAR yes 36305899
chr1 234847849 234847859 TCF4 JASPAR yes 36305900
chr1 234847851 234847856 USF2 TRANSFAC yes 36305901
Genes associated with rs555018555[chr1:234847853], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More