EnhancerDB
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  3. rs555034274[chr1:24620886]
Enhancers that have rs555034274[chr1:24620886]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 24599645 24630859 enh11619
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs555034274[chr1:24620886]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 24620883 24620893 HOXA13 JASPAR yes 27497135
chr1 24620883 24620893 HOXB13 JASPAR yes 27497136
chr1 24620883 24620893 HOXD13 JASPAR yes 27497137
chr1 24620884 24620895 CDX2 JASPAR yes 27497138
chr1 24620885 24620900 NFYB JASPAR yes 27497139
Genes associated with rs555034274[chr1:24620886], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More