EnhancerDB
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  3. rs555035401[chr1:234873433]
Enhancers that have rs555035401[chr1:234873433]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234827105 234875936 enh12795
Bone Marrow (K562) Liver Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs555035401[chr1:234873433]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234872806 234876373 ZNF274 GTRD no Bone Marrow (K562) 21397128
chr1 234873078 234878919 ZNF274 GTRD no Bone Marrow (K562) 21397129
chr1 234873078 234878919 ZNF274 GTRD no Bone Marrow (K562) 21397130
chr1 234873104 234878997 ZNF274 GTRD no Bone Marrow (K562) 21397131
chr1 234873104 234878997 ZNF274 GTRD no Bone Marrow (K562) 21397132
chr1 234873111 234880291 ZNF274 GTRD no Bone Marrow (K562) 21397133
chr1 234873111 234880291 ZNF274 GTRD no Bone Marrow (K562) 21397134
chr1 234873116 234878842 ZNF274 GTRD no Bone Marrow (K562) 21397135
chr1 234873116 234878842 ZNF274 GTRD no Bone Marrow (K562) 21397136
chr1 234873350 234877532 ZNF274 GTRD no Liver (HepG2) 21397137
chr1 234873350 234877532 ZNF274 GTRD no Liver (HepG2) 21397138
chr1 234873417 234873434 RXRA JASPAR yes 36309364
chr1 234873425 234873438 NR2F1 JASPAR yes 36309366
chr1 234873427 234873445 RARA JASPAR yes 36309367
chr1 234873429 234873433 ESR1 TRANSFAC yes 36309368
Genes associated with rs555035401[chr1:234873433], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More