EnhancerDB
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  3. rs555038316[chr1:168440755]
Enhancers that have rs555038316[chr1:168440755]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 168433465 168471139 enh12354
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs555038316[chr1:168440755]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 168439548 168440788 ZNF274 GTRD no Liver (HepG2) 21348186
chr1 168439548 168440788 ZNF274 GTRD no Liver (HepG2) 107844732
chr1 168440332 168440776 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21348244
chr1 168440332 168440776 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107844736
chr1 168440359 168440889 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107844737
chr1 168440748 168440756 FOXL1 JASPAR yes 32928446
chr1 168440749 168440760 FOXB1 JASPAR yes 32928447
Genes associated with rs555038316[chr1:168440755], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More