EnhancerDB
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  3. rs555066980[chr15:42226507]
Enhancers that have rs555066980[chr15:42226507]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42202285 42235244 enh3549
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr15 42226071 42226526 vista19767
VISTA
Transcript factors that have rs555066980[chr15:42226507]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42225998 42226528 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21651336
chr15 42225998 42226528 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108135273
chr15 42226015 42226531 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21651337
chr15 42226015 42226531 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108135274
chr15 42226359 42227153 ZNF274 GTRD no Liver (HepG2) 108135280
chr15 42226359 42227153 ZNF274 GTRD no Liver (HepG2) 108135281
chr15 42226459 42227224 ZNF274 GTRD no Liver (HepG2) 108135282
chr15 42226459 42227224 ZNF274 GTRD no Liver (HepG2) 108135283
chr15 42226461 42227142 ZNF274 GTRD no Liver (HepG2) 108135284
chr15 42226461 42227142 ZNF274 GTRD no Liver (HepG2) 108135285
chr15 42226491 42227140 ZNF274 GTRD no Liver (HepG2) 108135286
chr15 42226491 42227140 ZNF274 GTRD no Liver (HepG2) 108135287
chr15 42226496 42226507 STAT1 JASPAR yes 23007135
chr15 42226496 42226507 STAT3 JASPAR yes 23007136
chr15 42226496 42226507 STAT1 JASPAR yes 70514076
chr15 42226496 42226507 STAT3 JASPAR yes 70514077
chr15 42226496 42226509 ELF1 JASPAR yes 23007137
chr15 42226496 42226509 ELF1 JASPAR yes 70514078
chr15 42226497 42226509 EHF JASPAR yes 23007138
chr15 42226497 42226509 EHF JASPAR yes 70514079
chr15 42226498 42226509 ELF5 JASPAR yes 23007139
chr15 42226498 42226509 ELF5 JASPAR yes 70514080
chr15 42226499 42226509 ETV6 JASPAR yes 23007141
chr15 42226499 42226509 ETV6 JASPAR yes 70514082
chr15 42226499 42226517 NR3C1 JASPAR yes 23007142
chr15 42226499 42226517 NR3C1 JASPAR yes 70514083
chr15 42226500 42226508 EHF JASPAR yes 23007143
chr15 42226500 42226508 FEV JASPAR yes 23007144
chr15 42226500 42226508 EHF JASPAR yes 70514084
chr15 42226500 42226508 FEV JASPAR yes 70514085
chr15 42226501 42226508 SPI1 JASPAR yes 23007145
chr15 42226501 42226508 SPI1 JASPAR yes 70514086
chr15 42226501 42226522 IRF1 JASPAR yes 23007146
chr15 42226501 42226522 IRF1 JASPAR yes 70514087
chr15 42226503 42226518 STAT2 JASPAR yes 23007147
chr15 42226503 42226518 STAT2 JASPAR yes 70514088
chr15 42226503 42227220 ZNF274 GTRD no Liver (HepG2) 108135288
chr15 42226503 42227220 ZNF274 GTRD no Liver (HepG2) 108135289
chr15 42226506 42226521 FOXP1 JASPAR yes 23007148
chr15 42226506 42226521 FOXP1 JASPAR yes 70514089
chr15 42226507 42226522 FOXP1 JASPAR yes 23007149
chr15 42226507 42226522 FOXP1 JASPAR yes 70514090
Genes associated with rs555066980[chr15:42226507], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More