EnhancerDB
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  3. rs555082921[chr16:4339538]
Enhancers that have rs555082921[chr16:4339538]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 4330820 4352135 enh16514
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs555082921[chr16:4339538]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 4335970 4340905 TCF7L2 GTRD no Colon (HCT116) 21686304
chr16 4338616 4339634 ZNF143 GTRD no Epithelial (MCF-7) 21686363
chr16 4338679 4339570 ZNF143 GTRD no Epithelial (MCF-7) 21686364
chr16 4339522 4339541 PAX5 JASPAR yes 9267034
chr16 4339532 4339552 TP63 JASPAR yes 9267035
chr16 4339533 4339551 TP53 JASPAR yes 9267036
chr16 4339533 4339551 TP73 JASPAR yes 9267037
Genes associated with rs555082921[chr16:4339538], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More