EnhancerDB
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  3. rs555138424[chr9:38017527]
Enhancers that have rs555138424[chr9:38017527]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr9 38014305 38054668 enh10763
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr9 38017265 38017614 vista61936
VISTA
Transcript factors that have rs555138424[chr9:38017527]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr9 38017267 38017568 TEAD4 UCSC Txn Factor no Conserved 108550418
chr9 38017292 38017722 CTCF UCSC Txn Factor no Conserved 108550419
chr9 38017386 38017643 RAD21 UCSC Txn Factor no Conserved 108550420
chr9 38017514 38017533 CTCF JASPAR yes 84023533
chr9 38017514 38017533 CTCF JASPAR yes 95351778
chr9 38017515 38017530 ZIC4 JASPAR yes 84023534
chr9 38017515 38017530 ZIC4 JASPAR yes 95351779
chr9 38017516 38017530 ZIC1 JASPAR yes 84023535
chr9 38017516 38017530 ZIC1 JASPAR yes 95351780
chr9 38017521 38017532 E2F1 JASPAR yes 84023536
chr9 38017521 38017532 E2F1 JASPAR yes 95351781
chr9 38017522 38017527 SP1 TRANSFAC yes 84023537
chr9 38017522 38017527 SP1 TRANSFAC yes 95351782
Genes associated with rs555138424[chr9:38017527], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More