EnhancerDB
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  3. rs555228979[chr6:16403491]
Enhancers that have rs555228979[chr6:16403491]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 16389708 16416819 enh8977
Skin (Keratinocyte) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs555228979[chr6:16403491]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 16403491 16403495 LFA1 TRANSFAC yes 100297361
chr6 16403491 16403504 SCRT2 JASPAR yes 100297362
Genes associated with rs555228979[chr6:16403491], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More