EnhancerDB
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  3. rs555236255[chr12:46888178]
Enhancers that have rs555236255[chr12:46888178]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46872285 46895935 enh14678
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Lung Stomach Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Heart
chr12 46888080 46888552 vista13233
VISTA
Transcript factors that have rs555236255[chr12:46888178]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46887522 46888178 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108027571
chr12 46887522 46888178 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108027572
chr12 46887853 46888397 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21542056
chr12 46887853 46888397 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108027612
chr12 46887853 46888397 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108027613
chr12 46888023 46888673 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21542057
chr12 46888023 46888673 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108027614
chr12 46888070 46888694 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21542058
chr12 46888070 46888694 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108027615
chr12 46888070 46888911 TCF7L2 UCSC Txn Factor no Conserved 108027616
chr12 46888103 46888479 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21542059
chr12 46888103 46888479 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108027617
chr12 46888108 46888618 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21542060
chr12 46888108 46888618 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108027618
chr12 46888115 46888711 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21542061
chr12 46888115 46888711 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108027619
chr12 46888165 46888181 POU4F3 JASPAR yes 82395446
chr12 46888165 46888181 POU4F3 JASPAR yes 120629591
chr12 46888167 46888181 POU4F1 JASPAR yes 82395447
chr12 46888167 46888181 POU4F1 JASPAR yes 120629592
chr12 46888168 46888182 POU4F1 JASPAR yes 82395448
chr12 46888168 46888182 POU4F1 JASPAR yes 120629593
chr12 46888168 46888184 POU4F3 JASPAR yes 82395449
chr12 46888168 46888184 POU4F3 JASPAR yes 120629594
chr12 46888170 46888586 EP300 UCSC Txn Factor no Conserved 108027620
chr12 46888170 46888586 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108027621
chr12 46888171 46888187 SOX4 JASPAR yes 82395450
chr12 46888171 46888187 SOX4 JASPAR yes 120629595
Genes associated with rs555236255[chr12:46888178], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More