EnhancerDB
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  3. rs555244990[chr12:109085696]
Enhancers that have rs555244990[chr12:109085696]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 109075725 109093399 enh14973
Bone Marrow (K562) Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs555244990[chr12:109085696]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 109084686 109085997 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21571458
chr12 109084686 109085997 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108057214
chr12 109084686 109086300 POLR2A UCSC Txn Factor no Conserved 108057215
chr12 109085686 109085701 TFAP2A JASPAR yes 123613432
chr12 109085686 109085701 TFAP2C JASPAR yes 123613433
chr12 109085689 109085701 TFAP2A JASPAR yes 123613434
chr12 109085689 109085701 TFAP2B JASPAR yes 123613435
chr12 109085689 109085701 TFAP2C JASPAR yes 123613436
chr12 109085690 109085699 TFAP2A JASPAR yes 123613437
Genes associated with rs555244990[chr12:109085696], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More