EnhancerDB
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  3. rs555245846[chr2:27930440]
Enhancers that have rs555245846[chr2:27930440]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 27922526 27936875 enh18375
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs555245846[chr2:27930440]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 27930434 27930450 GLIS1 JASPAR yes 72583474
chr2 27930440 27930445 TFAP2A TRANSFAC yes 72583475
chr2 27930440 27930446 MZF1 JASPAR yes 72583476
Genes associated with rs555245846[chr2:27930440], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More