EnhancerDB
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  3. rs555310253[chr12:125255767]
Enhancers that have rs555310253[chr12:125255767]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs555310253[chr12:125255767]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125255436 125255812 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21582994
chr12 125255750 125255771 IRF1 JASPAR yes 124420334
chr12 125255752 125255767 STAT2 JASPAR yes 124420336
chr12 125255755 125255776 IRF1 JASPAR yes 124420337
chr12 125255756 125255771 FOXP1 JASPAR yes 124420338
chr12 125255757 125255772 STAT2 JASPAR yes 124420339
chr12 125255760 125255781 IRF1 JASPAR yes 124420340
chr12 125255761 125255776 FOXP1 JASPAR yes 124420341
chr12 125255762 125255777 STAT2 JASPAR yes 124420342
chr12 125255765 125255786 IRF1 JASPAR yes 124420343
chr12 125255766 125255781 FOXP1 JASPAR yes 124420344
chr12 125255767 125255782 STAT2 JASPAR yes 124420345
Genes associated with rs555310253[chr12:125255767], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More